Generation method

Generate all-atom structures under molecular constraints

Generate protein binders, small-molecule binders, ligand-only binders, or enzyme scaffolds from checksum-bound three-dimensional conditioning inputs.

Method details

Input checks

  • One PDB input whose checksum is retained in the Run
  • Mode-specific target segments and ligand identity supplied when required
  • 1–4 generated structures with an explicit seed

Expected results

  • Generated all-atom structures — Inspect each ordered design with its mode, seed, sequence, and checksum.
  • Interactive molecular artifacts — Open each PDB artifact in the 3D viewer and download the immutable file.
  • Conditioning and ligand evidence — Review target, ligand, active-site, and result-identity checks for the chosen mode.
Example results
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Ubi Biologics