Generation method
Design and score structure-conditioned protein sequences
Design or score sequences against one structure or an aligned conformational ensemble with the five released Caliby model profiles.
Method details
Input checks
- PDB coordinates with a consistent residue and chain mapping
- Scoring requires one canonical amino-acid sequence matching the structure length
- Design requests may generate 1–64 sequences with an explicit seed
Expected results
- Designed sequences and scores — Inspect every generated or submitted sequence with whole-protein Caliby energy.
- Residue-level energy table — Review per-position energy evidence in the immutable result Dataset.
- Native request and model evidence — Retain operation, model checkpoint, inputs, parameters, and result digests.
Example results
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