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Rat-brain antibody and target response — reduced companion

Explore local antibody expression, reversible target binding and turnover in three independent concentration systems.

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MODEL IN MOTION 18 sec

How do the fixed delivery and vector presets change brain antibody and target?

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IST 2.5E11 Vg AAV9 — fixed expression profile

Specified fixed initial drivers, local protein/target concentrations and hour calendar; no administered dose events.

0–1,344 hour

IST 2.5E11 Vg AAV9 — fixed expression profile

Specified fixed initial drivers, local protein/target concentrations and hour calendar; no administered dose events.

Readouts

Mab plasma · nM
Declared local concentration, dimensionless driver, flux or nonfeedback accounting quantity.
Mab isf · nM
Declared local concentration, dimensionless driver, flux or nonfeedback accounting quantity.
Target isf pct baseline · dimensionless
Declared local concentration, dimensionless driver, flux or nonfeedback accounting quantity.

Study purpose

  • How do the model's key biological readouts change under ist 2.5e11 vg aav9 — fixed expression profile?

Assumptions

  • Three independent local concentration systems represent plasma, brain interstitial fluid and CSF. There are no inter-space flows or compartment volumes.
  • Transient, durable and lagged expression drivers are dimensionless authored inputs; they are not measured vector copies, administered vector doses or observed nuclear DNA.
  • Profile route, dose and serotype labels identify fixed authored initial-condition sets. No administration, dose-to-transduction or vector transport law is represented.
  • Production scales, effective loss rates and initial drivers are authored conditional inputs; original profile fitting is outside this scope.
  • Human binding affinity is assumed for rat. Target baselines are primary-model equilibrium predictions used as specified setpoints, not independent measured concentrations.
  • A common effective target-turnover closure and a single-stage expression lag are declared assumptions.
  • Each complex contains one antibody and one target. Accounting remains a local concentration balance; no cross-space mass or volume-weighted conservation is asserted.
  • Forty read-only primary reference facts provide context and do not enter the companion equations or represent additional simulated observations.
  • No whole-primary-model, published-figure, sampled-population, clinical translation, immunogenicity or gene-delivery optimization result is assigned.

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Simulation time
h
h
1344 → 168

Time between reported samples.

h
12 → 1

2 changes · Variation 1

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Biology

Explore local antibody expression, reversible target binding and turnover in three independent concentration systems.

Explore local antibody expression, reversible target binding and turnover in three independent concentration systems.

Model details

13 parameters · 31 states · 31 equations · 64 derived outputs

Classification & API access
Therapeutic
Anti-TargetX antibody
Modality
Monoclonal antibody
Target
TargetX (anonymized target)
Disease / scope
Exploratory soluble TargetX binding and antibody expression
ParameterDefaultUnitDescription
Durable antibody production ratedurable_mab_production_nM_per_burden_h0.66nM/hFixed input of the declared conditional companion; see parameter provenance and scope.
Fast antibody production ratefast_mab_production_nM_per_burden_h1nM/hFixed input of the declared conditional companion; see parameter provenance and scope.
Fast AAV loss ratek_aav_fast_loss_h0.01751/hFixed input of the declared conditional companion; see parameter provenance and scope.
K complex lossk_complex_loss_h0.000861/hFixed input of the declared conditional companion; see parameter provenance and scope.
K mab lossk_mab_loss_h0.00061/hFixed input of the declared conditional companion; see parameter provenance and scope.
Nuclear AAV loss ratek_nuclear_loss_h0.000011/hFixed input of the declared conditional companion; see parameter provenance and scope.
Transgene expression ratek_transgene_h0.0330033003300331/hFixed input of the declared conditional companion; see parameter provenance and scope.
Target baseline csftarget_baseline_csf_nM0.023nMFixed input of the declared conditional companion; see parameter provenance and scope.
Target baseline isftarget_baseline_isf_nM0.026nMFixed input of the declared conditional companion; see parameter provenance and scope.
Target baseline plasmatarget_baseline_plasma_nM0.175nMFixed input of the declared conditional companion; see parameter provenance and scope.
Target degradation ratetarget_kdeg_h0.495105128971389531/hFixed input of the declared conditional companion; see parameter provenance and scope.
Target dissociation ratetarget_koff_h0.004271/hFixed input of the declared conditional companion; see parameter provenance and scope.
Target association ratetarget_kon_per_nM_h0.057702702702702711/(nM·h)Fixed input of the declared conditional companion; see parameter provenance and scope.

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